Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs74661633 | chr10:63481650 | T/G | 0 | 213 | 18.03 | 6.2 | 3.38 | KM Plot |
| KIRP | rs74775091 | chr5:153382218 | C/T | 2.23E-12 | 214 | 14.97 | 18.25 | 5.75 | KM Plot |
| KIRP | rs74784343 | chr5:153404027 | A/G | 2.23E-12 | 214 | 14.97 | 18.25 | 5.75 | KM Plot |
| KIRP | rs74812506 | chr10:63518193 | G/A | 0 | 214 | 18 | 7.92 | 2.13 | KM Plot |
| KIRP | rs74827820 | chr11:34770370 | A/T | 0 | 214 | 16.43 | 16.43 | 3.83 | KM Plot |
| KIRP | rs74847654 | chr5:153403645 | C/T | 2.23E-12 | 214 | 14.97 | 18.25 | 5.75 | KM Plot |
| KIRP | rs74865044 | chr10:74895525 | A/T | 5.24E-12 | 213 | 16.53 | 12.4 | 5.6 | KM Plot |
| KIRP | rs74866897 | chr10:74950306 | G/A | 6.41E-12 | 212 | 16.73 | 11.3 | 5.6 | KM Plot |
| KIRP | rs74942590 | chr12:7718773 | G/A | 0 | 209 | 15.33 | 19.27 | 6.7 | KM Plot |
| KIRP | rs7495295 | chr15:24654599 | G/A | 1.25E-6 | 206 | 15.88 | 16.47 | 9.77 | KM Plot |
| KIRP | rs74979335 | chr14:59846440 | T/A | 0.000228 | 209 | 14.83 | 19.4 | 11.2 | KM Plot |
| KIRP | rs74988574 | chr11:35032150 | T/C | 0 | 213 | 16.43 | 15.48 | 6.7 | KM Plot |
| KIRP | rs75024077 | chr11:34821105 | G/A | 0 | 213 | 15.2 | 17 | 3.83 | KM Plot |
| KIRP | rs75044636 | chr17:80785898 | C/T | 3.86E-5 | 210 | 15.1 | 17.6 | 15.15 | KM Plot |
| KIRP | rs75047678 | chr17:80785954 | C/A | 3.86E-5 | 210 | 15.1 | 17.6 | 15.15 | KM Plot |